STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAP1BRAP1B, member of RAS oncogene family. (184 aa)    
Predicted Functional Partners:
RAPGEF1
Rap guanine nucleotide exchange factor 1.
    
 0.969
MAPK10
Mitogen-activated protein kinase.
   
  0.924
MAPK9
Mitogen-activated protein kinase.
   
  0.924
MAPK8
Mitogen-activated protein kinase.
   
  0.924
PRKACB
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.923
RAP1A
Uncharacterized protein.
  
  
 
0.900
RASGRP1
RAS guanyl releasing protein 1.
    
 0.878
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.869
RAP1GAP2
RAP1 GTPase activating protein 2.
    
 0.848
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
    
 0.838
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.