STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERKLDAGKc domain-containing protein. (284 aa)    
Predicted Functional Partners:
ENSAPLP00000019805
Uncharacterized protein.
 
      0.900
FAM161A
FAM161 centrosomal protein A.
    
 0.689
TULP1
TUB like protein 1; Belongs to the TUB family.
   
 
 0.602
LCA5
Lebercilin LCA5.
    
 
 0.599
KIF20A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.510
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
    
 0.497
U3I4F0_ANAPP
Neutral ceramidase.
    
 0.470
KDSR
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.461
AGTPBP1
ATP/GTP binding protein 1.
     
 0.460
DHDDS
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.459
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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