STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHRF1PHD and ring finger domains 1. (1679 aa)    
Predicted Functional Partners:
APIP
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Functions in the methionine salvage pathway. May play a role in apoptosis.
      
 0.694
TAOK3
TAO kinase 3.
   
  
 0.686
SH2B3
SH2B adaptor protein 3.
      
 0.631
DEAF1
DEAF1 transcription factor.
   
  
 0.627
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
      
0.611
TMEM80
Transmembrane protein 80.
      
 0.611
SPPL3
Signal peptide peptidase like 3.
      
 0.608
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.515
RASSF7
Ras association domain family member 7.
 
    
 0.513
INSC
INSC spindle orientation adaptor protein.
   
  
 0.501
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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