STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA6Cholinergic receptor nicotinic alpha 6 subunit. (482 aa)    
Predicted Functional Partners:
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
  
 
0.913
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
  
0.907
CHRNB4
Cholinergic receptor nicotinic beta 4 subunit.
  
  
 
0.884
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.701
SERTM1
Serine rich and transmembrane domain containing 1.
   
  
 0.621
GPATCH4
G-patch domain containing 4.
   
  
 0.618
SINHCAF
SIN3-HDAC complex associated factor.
      
 0.611
TMEM52
Transmembrane protein 52.
      
 0.611
FUT10
Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family.
      
 0.611
PSD3
Pleckstrin and Sec7 domain containing 3.
      
 0.609
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.