STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIM1SIM bHLH transcription factor 1. (766 aa)    
Predicted Functional Partners:
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
    
 
0.823
OTP
Uncharacterized protein.
   
  
 0.754
ARNT
Aryl hydrocarbon receptor nuclear translocator.
    
 
0.697
MC4R
Melanocortin 4 receptor.
      
 0.635
NKX2-2
Homeobox domain-containing protein.
    
 
 0.614
DBX1
Developing brain homeobox 1.
   
  
 0.612
TRH
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
      
 0.611
POMC
Proopiomelanocortin.
   
  
 0.595
EN1
Homeobox protein engrailed-like.
   
  
 0.565
NPY
Neuropeptide Y.
      
 0.475
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.