STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM4Transglutaminase 4. (709 aa)    
Predicted Functional Partners:
ENSAPLP00000016847
Uncharacterized protein.
    
 0.676
U3I3C7_ANAPP
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.560
F2
Uncharacterized protein; Belongs to the peptidase S1 family.
     
 0.559
U3I1B1_ANAPP
Uncharacterized protein.
   
  
 0.550
U3I171_ANAPP
SERPIN domain-containing protein; Belongs to the serpin family.
     
 0.528
U3J696_ANAPP
Lysozyme g.
     
 0.487
MMP7
Matrix metallopeptidase 7.
   
 0.481
ACOD1
Aconitate decarboxylase 1.
      
 0.477
HBB
Hemoglobin subunit beta; Involved in oxygen transport from the lung to the various peripheral tissues.
   
  
 0.454
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
     
 0.443
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.