STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB1LIM domain binding 1. (225 aa)    
Predicted Functional Partners:
LMO2
LIM domain only 2.
    
 0.973
TAL2
TAL bHLH transcription factor 2.
    
 0.874
LHX2
LIM homeobox 2.
    
 0.848
ISL1
ISL LIM homeobox 1.
    
 0.839
ISL2
LIM zinc-binding domain-containing protein.
    
 0.839
LMO3
LIM domain only 3.
    
 0.828
LMO1
LIM domain only 1.
    
 0.828
LHX3
LIM homeobox 3.
    
 0.803
ENSAPLP00000026464
LIM zinc-binding domain-containing protein.
    
 0.803
SSBP2
Single stranded DNA binding protein 2.
   
 
 0.778
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.