STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC33Tetratricopeptide repeat domain 33. (345 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.834
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.747
GET4
Guided entry of tail-anchored proteins factor 4.
   
 0.686
CEMIP2
Cell migration inducing hyaluronidase 2.
     
 0.628
RALGPS2
Ral GEF with PH domain and SH3 binding motif 2.
      
 0.624
AGR2
Anterior gradient 2, protein disulphide isomerase family member.
      
 0.611
SEC61B
SEC61 translocon beta subunit.
   
 0.609
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.572
ENSAPLP00000026623
STI1 domain-containing protein.
   
 0.572
RARRES1
Retinoic acid receptor responder 1.
      
 0.558
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.