STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP42Nucleoporin 42. (413 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
    
 0.960
RAE1
Ribonucleic acid export 1.
    
 0.952
GLE1
GLE1 RNA export mediator.
    
 0.946
AAAS
Aladin WD repeat nucleoporin.
    
 0.943
XPO1
CRM1_C domain-containing protein.
     
 0.916
NUP88
Nucleoporin 88.
     
 0.915
NUP50
Nucleoporin 50.
     
 0.914
NUP35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
 0.914
NUP205
Nucleoporin 205.
     
 0.912
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.910
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.