STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD3LEM domain containing 3. (886 aa)    
Predicted Functional Partners:
SMAD1
Mothers against decapentaplegic homolog.
   
 
 0.830
BANF1
Barrier to autointegration factor 1.
   
 0.815
SMAD2
Mothers against decapentaplegic homolog.
   
 
 0.747
SMAD3
Mothers against decapentaplegic homolog.
   
 
 0.747
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.737
CDC5L
Cell division cycle 5 like.
   
 
 0.705
ZDHHC17
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
  
 0.621
LBR
Lamin B receptor.
     
 0.619
U3IFF2_ANAPP
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.611
SREK1IP1
SREK1 interacting protein 1.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.