STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IZV9_ANAPPUncharacterized protein. (700 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.842
GNL3
G protein nucleolar 3.
  
 0.802
EBNA1BP2
EBNA1 binding protein 2.
   
 0.792
SF3B1
Splicing factor 3b subunit 1.
   
 0.753
MTREX
Mtr4 exosome RNA helicase.
   
 0.725
MYBBP1A
MYB binding protein 1a.
   
 0.715
ENSAPLP00000029053
RRM domain-containing protein.
   
 0.708
DKC1
DKCLD domain-containing protein.
  
 
 0.704
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
  
0.673
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.672
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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