STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R7LRRcap domain-containing protein. (455 aa)    
Predicted Functional Partners:
CTDSPL
CTD small phosphatase like.
 
      0.894
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.811
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.810
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
   
 0.808
ZFYVE28
Zinc finger FYVE-type containing 28.
   
  
 0.748
SUPT7L
SPT7 like, STAGA complex gamma subunit.
      
 0.713
DCTN3
Dynactin subunit 3.
   
  
 0.691
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
      
 0.676
OST4
Oligosaccharyltransferase complex subunit 4, non-catalytic.
      
 0.676
CMTR1
Cap methyltransferase 1.
      
 0.675
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.