STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3J044_ANAPPUncharacterized protein. (957 aa)    
Predicted Functional Partners:
DHX36
DEAH-box helicase 36.
   
 0.987
MYBBP1A
MYB binding protein 1a.
   
 0.972
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 
 0.966
DEK
DEK proto-oncogene.
     
 0.959
SF3B1
Splicing factor 3b subunit 1.
   
 0.953
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.929
DDX1
DEAD-box helicase 1.
   
 
0.927
MYO1C
Myosin IC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.881
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.844
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.842
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.