STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC44A5Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family. (715 aa)    
Predicted Functional Partners:
TTLL7
Tubulin tyrosine ligase like 7.
      
 0.621
ST6GALNAC5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
   
  
 0.613
LRTM2
Leucine rich repeats and transmembrane domains 2.
      
 0.611
APBB2
Amyloid beta precursor protein binding family B member 2.
      
 0.602
NCS1
Uncharacterized protein.
   
  
 0.588
U3IH39_ANAPP
Uncharacterized protein.
      
 0.576
ENSAPLP00000019486
DUF4195 domain-containing protein.
      
 0.576
ZNF280D
Uncharacterized protein.
      
 0.576
TRAPPC9
Trafficking protein particle complex 9.
      
 0.524
PPT1
Palmitoyl-protein thioesterase 1.
   
  
 0.476
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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