STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL12A1Collagen type XII alpha 1 chain. (3076 aa)    
Predicted Functional Partners:
OGFRL1
Opioid growth factor receptor like 1.
      
 0.634
B3GAT2
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.634
MMP7
Matrix metallopeptidase 7.
   
 0.605
FILIP1
Filamin A interacting protein 1.
 
  
 0.490
FMOD
Fibromodulin.
   
 0.489
KCNQ5
Potassium voltage-gated channel subfamily Q member 5; Belongs to the potassium channel family.
      
 0.485
TGM2
Transglutaminase 2.
    
 0.473
RIMS1
Regulating synaptic membrane exocytosis 1.
      
 0.454
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.