STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE1Signal peptide, CUB domain and EGF like domain containing 1. (979 aa)    
Predicted Functional Partners:
DNAAF2
Protein kintoun; Required for cytoplasmic pre-assembly of axonemal dyneins, thereby playing a central role in motility in cilia and flagella. Involved in pre-assembly of dynein arm complexes in the cytoplasm before intraflagellar transport loads them for the ciliary compartment. Belongs to the PIH1 family. Kintoun subfamily.
    
 0.623
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
  
  
 
0.604
FAM83A
Family with sequence similarity 83 member A.
   
  
 0.591
ARID4B
AT-rich interaction domain 4B.
    
 0.551
C1QL3
Complement C1q like 3.
    
 0.497
CBLN2
Cerebellin 2 precursor.
    
 0.497
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.493
SV2B
Synaptic vesicle glycoprotein 2B.
    
 0.489
KCND2
BTB_2 domain-containing protein.
    
 
 0.488
HTR1B
5-hydroxytryptamine receptor 1B.
   
 0.484
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.