STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR47WD repeat domain 47. (919 aa)    
Predicted Functional Partners:
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
      
 0.748
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
 
 
 
 0.719
WDR78
WD repeat domain 78.
      
 0.635
WDR63
WD repeat domain 63.
      
 0.625
TBCK
TBC1 domain containing kinase.
      
 0.611
NME6
Nucleoside diphosphate kinase.
      
 0.611
FBXO33
F-box protein 33.
      
 0.611
CNOT6
CCR4-NOT transcription complex subunit 6.
      
 0.586
POLR2E
RNA polymerase II subunit E.
      
 0.558
NKAP
NFKB activating protein.
 
    
 0.507
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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