STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD6Programmed cell death 6. (191 aa)    
Predicted Functional Partners:
SEC31A
SEC31 homolog A, COPII coat complex component.
    
 0.766
BCL2L13
BCL2 like 13.
      
 0.739
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2.
      
 0.727
RAP2A
RAP2A, member of RAS oncogene family.
   
  
 0.712
KLHL12
Kelch like family member 12.
    
 0.656
SEC31B
SEC31 homolog B, COPII coat complex component.
    
 
 0.650
GPM6B
Glycoprotein M6B.
      
 0.632
RREB1
Ras responsive element binding protein 1.
      
 0.631
WEE1
WEE1 G2 checkpoint kinase.
      
 0.631
PDCD4
Programmed cell death 4.
     
 0.617
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.