STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBDC1Polysaccharide biosynthesis domain containing 1. (159 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.732
U3ILH2_ANAPP
Uncharacterized protein.
      
 0.586
TRAPPC13
Trafficking protein particle complex 13.
      
 0.586
TTLL12
Tubulin tyrosine ligase like 12.
    
   0.572
LSM14B
LSM family member 14B.
      
 0.548
SH3BGRL
SH3 domain binding glutamate rich protein like.
      
 0.539
RIPOR3
RIPOR family member 3.
      
 0.532
SYNDIG1
Synapse differentiation inducing 1.
      
 0.524
DPH6
Diphthami_syn_2 domain-containing protein.
      
 0.521
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.493
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.