STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCZSarcoglycan zeta. (286 aa)    
Predicted Functional Partners:
ENSAPLP00000019534
Uncharacterized protein.
 
  
  0.944
LEPROTL1
Leptin receptor overlapping transcript like 1.
      
 0.609
DAG1
Dystroglycan 1.
    
 0.601
SRD5A3
Steroid 5 alpha-reductase 3.
      
 0.593
SSPN
Sarcospan.
   
 0.579
SGCG
Sarcoglycan gamma.
  
 
0.578
ENSAPLP00000017950
Uncharacterized protein.
   
 0.568
SGCE
Sarcoglycan epsilon.
   
 0.568
PWWP2B
PWWP domain containing 2B.
      
 0.545
USP6NL
USP6 N-terminal like.
      
 0.487
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.