STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR55WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis. Belongs to the WD repeat WDR55 family. (400 aa)    
Predicted Functional Partners:
ENSAPLP00000022563
RED_C domain-containing protein.
 
      0.898
WDR12
WD repeat domain 12.
  
 
 0.803
LYRM2
LYR motif containing 2; Belongs to the complex I LYR family.
      
 0.749
PGAP2
Post-GPI attachment to proteins 2.
      
 0.749
RNF213
Ring finger protein 213.
      
 0.621
PTPRE
Protein tyrosine phosphatase receptor type E.
 
    
 0.621
PCDHAC2
Protocadherin alpha subfamily C, 2.
      
 0.595
PCDHAC1
Protocadherin alpha subfamily C, 1.
      
 0.595
TTC27
Tetratricopeptide repeat domain 27.
   
    0.567
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
  
  
 0.561
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.