STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJD4Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (417 aa)    
Predicted Functional Partners:
SYCP2L
SYCP2_SLD domain-containing protein.
      
 0.748
CCNY
Cyclin Y; Belongs to the cyclin family.
 
    
 0.648
TBC1D22B
Uncharacterized protein.
      
 0.627
TBC1D22B-2
Rab-GAP TBC domain-containing protein.
      
 0.627
KIF21B
Kinesin family member 21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.622
NDST4
N-deacetylase and N-sulfotransferase 4.
   
  
 0.620
TULP1
TUB like protein 1; Belongs to the TUB family.
   
  
 0.614
LEPROTL1
Leptin receptor overlapping transcript like 1.
      
 0.611
ELL2
Elongation factor for RNA polymerase II 2.
      
 0.611
NOVA1
NOVA alternative splicing regulator 1.
      
 0.610
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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