STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSD3Uncharacterized protein. (485 aa)    
Predicted Functional Partners:
ENSAPLP00000017231
PWWP domain-containing protein.
 
      0.900
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.670
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.670
ENSAPLP00000028245
Uncharacterized protein.
    
 0.584
EED
Embryonic ectoderm development.
   
 0.577
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.557
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.557
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.505
BARD1
BRCA1 associated RING domain 1.
   
 0.503
MRE11
MRE11 homolog, double strand break repair nuclease.
   
 0.502
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.