STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAT1T cell receptor associated transmembrane adaptor 1. (151 aa)    
Predicted Functional Partners:
CD247
CD247 molecule.
   
 0.672
CD3E
CD3e molecule.
   
 
 0.636
SH2D1A
SH2 domain containing 1A.
   
  
 0.636
U3ISR2_ANAPP
Ig_4 domain-containing protein.
   
 
 0.628
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.576
ILDR1
Immunoglobulin like domain containing receptor 1.
  
   
 0.576
ENSAPLP00000020285
IGv domain-containing protein.
   
  
 0.570
UBASH3A
Ubiquitin associated and SH3 domain containing A.
   
  
 0.541
CD6
CD6 molecule.
   
 
 0.519
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
     
 0.518
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.