Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DDX20 | GEMIN2 | ENSAPLP00000013658 | ENSAPLP00000011848 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | 0.997 |
| DDX20 | GEMIN4 | ENSAPLP00000013658 | ENSAPLP00000023160 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Gem nuclear organelle associated protein 4. | 0.998 |
| DDX20 | GEMIN5 | ENSAPLP00000013658 | ENSAPLP00000006455 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Gem nuclear organelle associated protein 5. | 0.998 |
| DDX20 | GEMIN8 | ENSAPLP00000013658 | ENSAPLP00000016825 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Gem nuclear organelle associated protein 8. | 0.996 |
| DDX20 | SMN1 | ENSAPLP00000013658 | ENSAPLP00000025318 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Tudor domain-containing protein. | 0.998 |
| DDX20 | SNRPD1 | ENSAPLP00000013658 | ENSAPLP00000012020 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.848 |
| DDX20 | SNRPD3 | ENSAPLP00000013658 | ENSAPLP00000008346 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D3. | 0.810 |
| DDX20 | SNRPF | ENSAPLP00000013658 | ENSAPLP00000025809 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein polypeptide F. | 0.860 |
| DDX20 | SNRPG | ENSAPLP00000013658 | ENSAPLP00000003436 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein polypeptide G. | 0.803 |
| DDX20 | STRAP | ENSAPLP00000013658 | ENSAPLP00000010683 | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | Serine/threonine kinase receptor associated protein. | 0.977 |
| GEMIN2 | DDX20 | ENSAPLP00000011848 | ENSAPLP00000013658 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | DEAD-box helicase 20; Belongs to the DEAD box helicase family. | 0.997 |
| GEMIN2 | GEMIN4 | ENSAPLP00000011848 | ENSAPLP00000023160 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Gem nuclear organelle associated protein 4. | 0.990 |
| GEMIN2 | GEMIN5 | ENSAPLP00000011848 | ENSAPLP00000006455 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Gem nuclear organelle associated protein 5. | 0.983 |
| GEMIN2 | GEMIN8 | ENSAPLP00000011848 | ENSAPLP00000016825 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Gem nuclear organelle associated protein 8. | 0.990 |
| GEMIN2 | SMN1 | ENSAPLP00000011848 | ENSAPLP00000025318 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Tudor domain-containing protein. | 0.992 |
| GEMIN2 | SNRPD1 | ENSAPLP00000011848 | ENSAPLP00000012020 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.958 |
| GEMIN2 | SNRPD3 | ENSAPLP00000011848 | ENSAPLP00000008346 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Small nuclear ribonucleoprotein Sm D3. | 0.785 |
| GEMIN2 | SNRPF | ENSAPLP00000011848 | ENSAPLP00000025809 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Small nuclear ribonucleoprotein polypeptide F. | 0.940 |
| GEMIN2 | SNRPG | ENSAPLP00000011848 | ENSAPLP00000003436 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Small nuclear ribonucleoprotein polypeptide G. | 0.932 |
| GEMIN2 | STRAP | ENSAPLP00000011848 | ENSAPLP00000010683 | Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. | Serine/threonine kinase receptor associated protein. | 0.793 |
page 1 of 6