STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3J2N8_ANAPPDBC1 domain-containing protein. (566 aa)    
Predicted Functional Partners:
ENSAPLP00000026975
Uncharacterized protein.
 
     0.939
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
  0.663
STOX1
Storkhead box 1.
 
    
 0.648
STOX2
Storkhead box 2.
      
 0.595
TCERG1
Transcription elongation regulator 1.
   
 
  0.545
SIRT5
NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
 0.526
SIRT1
Sirtuin 1.
    
 0.526
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
   
  
 0.523
CCDC85A
Coiled-coil domain containing 85A.
      
 0.521
TCERG1L
Transcription elongation regulator 1 like.
   
 
  0.509
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.