STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN3PDZ domain containing ring finger 3. (779 aa)    
Predicted Functional Partners:
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.795
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.703
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.683
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.657
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.644
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
  0.599
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.578
TRADD
TNFRSF1A associated via death domain.
    
 0.518
RNASEL
Uncharacterized protein.
    
 0.461
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.459
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.