WASHC5 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

WASHC5

WASH complex subunit 5. (1159 aa)

Predicted Functional Partners:

WASHC4

0.934

WASHC3

0.879

WASHC1

0.833

ENSAPLP00000019560

0.833

U3I692_ANAPP

0.704

WASHC2C

0.704

CAPZB

0.672

HEATR1

0.636

COPA

0.611

ALDH18A1

0.610

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH18A1	WASHC5	ENSAPLP00000005957	ENSAPLP00000014036	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	WASH complex subunit 5.	0.610
CAPZB	ENSAPLP00000019560	ENSAPLP00000024655	ENSAPLP00000019560	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	WH2 domain-containing protein.	0.421
CAPZB	WASHC1	ENSAPLP00000024655	ENSAPLP00000018929	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	WASH_WAHD domain-containing protein.	0.421
CAPZB	WASHC3	ENSAPLP00000024655	ENSAPLP00000031123	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	WASH complex subunit 3.	0.473
CAPZB	WASHC4	ENSAPLP00000024655	ENSAPLP00000014885	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	WASH complex subunit 4.	0.531
CAPZB	WASHC5	ENSAPLP00000024655	ENSAPLP00000014036	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	WASH complex subunit 5.	0.672
COPA	HEATR1	ENSAPLP00000013744	ENSAPLP00000007788	Coatomer protein complex subunit alpha.	HEAT repeat containing 1.	0.687
COPA	WASHC5	ENSAPLP00000013744	ENSAPLP00000014036	Coatomer protein complex subunit alpha.	WASH complex subunit 5.	0.611
ENSAPLP00000019560	CAPZB	ENSAPLP00000019560	ENSAPLP00000024655	WH2 domain-containing protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.421
ENSAPLP00000019560	U3I692_ANAPP	ENSAPLP00000019560	ENSAPLP00000002763	WH2 domain-containing protein.	Uncharacterized protein.	0.601
ENSAPLP00000019560	WASHC1	ENSAPLP00000019560	ENSAPLP00000018929	WH2 domain-containing protein.	WASH_WAHD domain-containing protein.	0.933
ENSAPLP00000019560	WASHC2C	ENSAPLP00000019560	ENSAPLP00000029855	WH2 domain-containing protein.	CAP-ZIP_m domain-containing protein.	0.601
ENSAPLP00000019560	WASHC3	ENSAPLP00000019560	ENSAPLP00000031123	WH2 domain-containing protein.	WASH complex subunit 3.	0.885
ENSAPLP00000019560	WASHC4	ENSAPLP00000019560	ENSAPLP00000014885	WH2 domain-containing protein.	WASH complex subunit 4.	0.781
ENSAPLP00000019560	WASHC5	ENSAPLP00000019560	ENSAPLP00000014036	WH2 domain-containing protein.	WASH complex subunit 5.	0.833
HEATR1	COPA	ENSAPLP00000007788	ENSAPLP00000013744	HEAT repeat containing 1.	Coatomer protein complex subunit alpha.	0.687
HEATR1	WASHC5	ENSAPLP00000007788	ENSAPLP00000014036	HEAT repeat containing 1.	WASH complex subunit 5.	0.636
U3I692_ANAPP	ENSAPLP00000019560	ENSAPLP00000002763	ENSAPLP00000019560	Uncharacterized protein.	WH2 domain-containing protein.	0.601
U3I692_ANAPP	WASHC1	ENSAPLP00000002763	ENSAPLP00000018929	Uncharacterized protein.	WASH_WAHD domain-containing protein.	0.601
U3I692_ANAPP	WASHC2C	ENSAPLP00000002763	ENSAPLP00000029855	Uncharacterized protein.	CAP-ZIP_m domain-containing protein.	0.900