STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCAREPhotoreceptor cilium actin regulator. (1298 aa)    
Predicted Functional Partners:
CDH23
Cadherin related 23.
      
 0.611
CEP250
Centrosomal protein 250.
      
 0.611
PDZD7
PDZ domain-containing protein.
      
 0.609
ENSAPLP00000017270
Uncharacterized protein.
      
 0.609
USH1G
USH1 protein network component sans.
      
 0.521
USH2A
Usherin.
      
 0.483
CLRN1
Clarin 1.
      
 0.479
COBLL1
Cordon-bleu WH2 repeat protein like 1.
  
     0.449
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.437
DZANK1
Double zinc ribbon and ankyrin repeat domains 1.
      
 0.431
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.