STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAAPhospholipase A2 activating protein. (884 aa)    
Predicted Functional Partners:
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 
 0.967
YOD1
YOD1 deubiquitinase.
    
 
 0.965
ENSAPLP00000023897
Uncharacterized protein.
    
 0.919
NSFL1C
NSFL1 cofactor.
    
 
 0.877
UBXN2B
UBX domain protein 2B.
    
 
 0.877
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.832
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.821
FAF1
Fas associated factor 1.
   
 
 0.810
FAF2
Fas associated factor family member 2.
   
 
 0.806
ENSAPLP00000023021
Uncharacterized protein.
   
 
 0.798
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.