STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HINFPHistone H4 transcription factor. (533 aa)    
Predicted Functional Partners:
GSC
Goosecoid homeobox.
    
   0.797
VANGL2
Vang-like protein.
      
 0.634
PLK1
Serine/threonine-protein kinase PLK.
      
 0.611
FOXI1
Forkhead box I1.
      
 0.596
FOXI2
Forkhead box I2.
      
 0.596
LAYN
Layilin.
      
 0.545
RNF26
Ring finger protein 26.
      
 0.545
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
      
 0.541
FRMD4B
FERM domain containing 4B.
      
 0.541
ARL6IP5
PRA1 family protein.
      
 0.541
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.