STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMBIM4Uncharacterized protein; Belongs to the BI1 family. (238 aa)    
Predicted Functional Partners:
RCN2
Reticulocalbin 2.
      
 0.635
CHP1
Calcineurin like EF-hand protein 1.
      
 0.610
LEMD3
LEM domain containing 3.
      
 0.586
LLPH
LLP homolog, long-term synaptic facilitation factor.
 
    
 0.566
SIGMAR1
Sigma non-opioid intracellular receptor 1.
      
 0.475
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
   
  
 0.449
DDX58
DExD/H-box helicase 58.
      
 0.441
TMEM97
Transmembrane protein 97.
     
 0.434
U3HZ79_ANAPP
Uncharacterized protein.
      
 0.429
GHITM
Growth hormone inducible transmembrane protein; Belongs to the BI1 family.
   
  
 0.415
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.