STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPATNuclear protein, coactivator of histone transcription. (1232 aa)    
Predicted Functional Partners:
CASP8AP2
Caspase 8 associated protein 2.
   
 
 0.536
ENSAPLP00000025298
Uncharacterized protein.
    
 
 0.529
IQCB1
IQ motif containing B1.
   
 
 0.522
LSM11
LSM11, U7 small nuclear RNA associated.
      
 0.487
RBM46
RNA binding motif protein 46.
    
 
 0.442
GXYLT1
Glucoside xylosyltransferase 1.
    
 0.439
DISP1
Dispatched RND transporter family member 1.
     
 0.438
ENSAPLP00000027202
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
  0.433
U3I079_ANAPP
Uncharacterized protein.
    
 
 0.426
HINFP
Histone H4 transcription factor.
    
 
 0.426
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.