STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF6Serine and arginine rich splicing factor 6. (348 aa)    
Predicted Functional Partners:
SRPK1
SRSF protein kinase 1.
    
 0.979
TRA2B
RRM domain-containing protein.
  
 0.836
SRSF2
RRM domain-containing protein.
  
0.779
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.779
ENSAPLP00000029053
RRM domain-containing protein.
  
 0.760
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.759
U3J272_ANAPP
RRM domain-containing protein.
   
0.759
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.728
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
   
 0.724
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 0.722
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.