STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF4A3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (447 aa)    
Predicted Functional Partners:
ENSAPLP00000029661
Uncharacterized protein.
    
 0.998
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.997
MAGOH
Mago homolog, exon junction complex subunit.
   
 0.996
ENSAPLP00000029053
RRM domain-containing protein.
   
 0.994
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.989
SRSF1
Uncharacterized protein.
  
 0.982
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
   
 0.980
NOM1
Nucleolar protein with MIF4G domain 1.
   
 
 0.969
U3J272_ANAPP
RRM domain-containing protein.
   
 0.969
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
 0.957
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]