STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHX4Epoxide hydrolase 4. (366 aa)    
Predicted Functional Partners:
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
      
 0.737
BTBD8
BTB domain containing 8.
 
      0.636
FBXL17
F-box and leucine rich repeat protein 17.
      
 0.609
PLA2G4F
PLA2c domain-containing protein.
   
  
 0.605
PALB2
Partner and localizer of BRCA2.
  
 0.580
COP1
COP1 E3 ubiquitin ligase.
      
 0.577
NEXMIF
Neurite extension and migration factor.
      
 0.575
GSC
Goosecoid homeobox.
    
 
 0.529
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
   
  
 0.520
HMMR
Hyaluronan mediated motility receptor.
   
 0.506
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.