STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB15Ankyrin repeat and SOCS box containing 15. (591 aa)    
Predicted Functional Partners:
SLC13A1
Solute carrier family 13 member 1.
    
 
 0.750
SCO1
SCO cytochrome c oxidase assembly protein 1.
     
 0.748
NDUFA5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.674
LMOD2
Leiomodin 2.
 
 
 
 0.639
WASL
WASP like actin nucleation promoting factor.
   
 0.616
MTPN
Myotrophin.
  
 
 
 0.519
CISH
Cytokine inducible SH2 containing protein.
     
 0.517
TTC30B
Uncharacterized protein.
    
 0.499
ASB4
Ankyrin repeat and SOCS box containing 4.
  
 
0.493
REL
REL proto-oncogene, NF-kB subunit.
   
 0.488
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.