STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional regulating factor 1. (1167 aa)    
Predicted Functional Partners:
ZBTB17
Zinc finger and BTB domain containing 17.
    
 
 0.615
HSDL2
Hydroxysteroid dehydrogenase like 2.
      
 0.612
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.612
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
      
 0.611
BRPF1
Uncharacterized protein.
      
 0.611
RAPGEF3
Rap guanine nucleotide exchange factor 3.
      
 0.611
NAAA
N-acylethanolamine acid amidase; Belongs to the acid ceramidase family.
      
 0.587
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
      
 0.587
CCDC51
Uncharacterized protein.
      
 0.556
ELMSAN1
Uncharacterized protein.
    
 
0.507
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.