STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf146Chromosome 1 open reading frame 146. (161 aa)    
Predicted Functional Partners:
C15orf41
Chromosome 15 open reading frame 41.
  
 0.845
CHIC2
Cysteine rich hydrophobic domain 2.
      
 0.610
PALB2
Partner and localizer of BRCA2.
  
 0.580
SP3
Sp3 transcription factor.
   
 
 0.543
AASDH
Aminoadipate-semialdehyde dehydrogenase.
    
 0.502
HFM1
Helicase for meiosis 1.
      
 0.485
BARHL2
BarH like homeobox 2.
      
 0.476
BARHL1
Homeobox domain-containing protein.
      
 0.476
MSH4
MutS homolog 4.
      
 0.459
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.