STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC16Thioredoxin domain containing 16. (840 aa)    
Predicted Functional Partners:
DDHD1
DDHD domain-containing protein.
      
 0.849
GAK
Cyclin G associated kinase.
    
 0.836
STYX
Serine/threonine/tyrosine interacting protein.
     
 0.807
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.757
RTRAF
RNA transcription, translation and transport factor.
      
 0.748
GPR137C
G protein-coupled receptor 137C.
      
 0.747
PSMC6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
    
 
 0.659
FUCA1
Alpha-L-fucosidase 1.
    
 0.623
NID2
Nidogen 2.
   
 
 0.614
GNG2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.612
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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