STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3J5Q1_ANAPPPID domain-containing protein. (231 aa)    
Predicted Functional Partners:
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.609
TOR1AIP2
Torsin 1A interacting protein 2.
      
 0.592
TOR1AIP1
Torsin 1A interacting protein 1.
      
 0.592
SOAT1
O-acyltransferase.
      
 0.571
NKAP
NFKB activating protein.
    
   0.568
DDX41
DEAD-box helicase 41.
    
   0.567
ENSAPLP00000030999
Uncharacterized protein.
 
 
  
 0.518
AMDHD1
Amidohydrolase domain containing 1.
      
 0.516
GDA
Guanine deaminase.
      
 0.516
ZYX
Zyxin.
    
 
 0.511
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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