STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13BVacuolar protein sorting 13 homolog B. (4032 aa)    
Predicted Functional Partners:
VPS13C
Vacuolar protein sorting 13 homolog C.
   
  
0.664
KIAA1324
KIAA1324.
    
 
 0.636
GAK
Cyclin G associated kinase.
    
 
 0.622
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.610
N4BP2
NEDD4 binding protein 2.
      
 0.603
TMEM117
Transmembrane protein 117.
      
 0.602
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.602
TUBGCP6
Tubulin gamma complex associated protein 6.
      
 0.586
SLC2A13
Solute carrier family 2 member 13.
      
 0.586
TMEM161B
Transmembrane protein 161B.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.