STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PASD1Uncharacterized protein. (828 aa)    
Predicted Functional Partners:
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
   
0.794
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
0.794
PER3
Period circadian regulator 3.
    
0.682
PER2
Period circadian regulator 2.
    
0.682
NPAS3
Neuronal PAS domain protein 3.
    
0.584
CIPC
CLOCK interacting pacemaker.
    
 
 0.569
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
0.560
EPAS1
Endothelial PAS domain protein 1.
    
0.560
U3J4W3_ANAPP
Uncharacterized protein.
    
 0.550
CSNK1D
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 0.543
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.