STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSMCE1NSE1 homolog, SMC5-SMC6 complex component. (236 aa)    
Predicted Functional Partners:
U3IPC5_ANAPP
SMC_N domain-containing protein.
    
 0.998
NSMCE4A
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.998
SMC6
Structural maintenance of chromosomes 6.
    
 0.998
NSMCE2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.998
PRAM1
hSH3 domain-containing protein.
    
 0.995
SMC3
Structural maintenance of chromosomes protein.
    
 0.859
SMC1B
Structural maintenance of chromosomes protein.
    
 0.858
SMC2
Structural maintenance of chromosomes protein.
    
 0.801
SMC4
Structural maintenance of chromosomes protein.
    
 0.796
SLF1
SMC5-SMC6 complex localization factor 1.
      
 0.747
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.