STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP47Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1375 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
  
 0.703
U3IFZ0_ANAPP
DNA_pol_B_thumb domain-containing protein.
    
 0.597
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.597
ENSAPLP00000024926
HHH_8 domain-containing protein.
    
 0.597
ENSAPLP00000026294
HHH_8 domain-containing protein.
    
 0.597
IRAK2
Interleukin 1 receptor associated kinase 2.
    
 
 0.589
CCT2
Chaperonin containing TCP1 subunit 2.
      
 0.586
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.572
POLL
DNA polymerase lambda; Belongs to the DNA polymerase type-X family.
    
 0.546
JOSD1
Josephin domain containing 1.
      
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.