STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSTKPhosphoseryl-tRNA kinase. (323 aa)    
Predicted Functional Partners:
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
     
 0.992
SARS1
Seryl-tRNA synthetase.
      
 0.925
SECISBP2
SECIS binding protein 2.
      
 0.885
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
      
 0.748
SCLY
Selenocysteine lyase.
      
 0.646
SELENOK
Selenoprotein K.
      
 0.611
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
      
 0.610
SEPHS1
Selenophosphate synthetase 1.
      
 0.588
ENSAPLP00000017126
Uncharacterized protein.
      
 0.583
TRNAU1AP
tRNA selenocysteine 1 associated protein 1.
      
 0.578
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.