STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCAM1Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
   
 0.977
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 
 0.963
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
   
 0.945
IL6
Uncharacterized protein.
   
 
 0.788
ENSAPLP00000020265
Uncharacterized protein.
    
 
 0.765
CD4
Ig-like domain-containing protein.
   
 0.742
CXCL12
SCY domain-containing protein; Belongs to the intercrine alpha (chemokine CxC) family.
   
  
 0.714
IL10
Interleukin 10.
     
 0.688
ITGB2
Integrin beta.
   
 
 0.681
VWF
Von Willebrand factor.
   
 
 0.672
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.