STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAPGEF1Rap guanine nucleotide exchange factor 1. (773 aa)    
Predicted Functional Partners:
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.996
CRK
CRK proto-oncogene, adaptor protein.
    
 0.993
CBLB
Cbl proto-oncogene B.
    
 0.971
CBL
Cbl proto-oncogene.
    
 0.971
RAP1B
RAP1B, member of RAS oncogene family.
    
 0.969
RAP1A
Uncharacterized protein.
    
 0.969
RHOQ
Ras homolog family member Q.
    
 0.950
BCAR1
BCAR1 scaffold protein, Cas family member.
    
 0.950
GRB2
Growth factor receptor bound protein 2.
   
 0.837
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.724
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.