STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM45Tripartite motif containing 45. (492 aa)    
Predicted Functional Partners:
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.663
SYTL2
Synaptotagmin like 2.
    
 0.627
ENSAPLP00000028388
Uncharacterized protein.
      
 0.621
EIF3D
Eukaryotic translation initiation factor 3 subunit D.
    
 
 0.612
ADAM11
ADAM metallopeptidase domain 11.
      
 0.611
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 
 0.556
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
      
 0.548
VTCN1
V-set domain containing T cell activation inhibitor 1.
 
      0.511
ENSAPLP00000016995
Uncharacterized protein.
      
 0.497
MROH1
Maestro heat like repeat family member 1.
      
 0.497
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.