STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMBRA1Autophagy and beclin 1 regulator 1. (1166 aa)    
Predicted Functional Partners:
BECN1
Uncharacterized protein.
    
 0.993
ATG14
Autophagy related 14.
     
 0.921
UVRAG
UV radiation resistance associated.
      
 0.890
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.866
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
   
 
 0.822
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 0.816
DDB1
Damage specific DNA binding protein 1.
    
 0.814
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.777
ATG101
Uncharacterized protein.
    
 0.773
DDA1
DET1 and DDB1 associated 1.
    
 0.755
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.